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Idx Title Pathway Keywords Tissue-Cell Type Disease Cell Level Ref
1 RBphosphoE2F -Cell cycleubiquitous - nucleus8939849
2 Cytokine_Receptors -Cytokine signaling - - intracellular7716810
3 T_cell_receptor -Antigen presentation signalingT cell - intracellular, cell membrane, cytoplasm, nucleus, transcription7576059
4 cyclins_&_p27_cell_cycle -Cell cycleubiquitous - nucleus8939849
5 B7_CD40_B-cell_activa -B cell activationimmune - nucleus-
6 CD23_engagement -Reactive oxygenmonocyte - intracellular8579750
7 IL17_hematopoesis -Hematopoesisimmune - cytoplasm-
8 MonocytesIFNF_IL4 -Monocyte activationmonocyte - - 8579750
9 CKS-17_cytokines -TH1, TH2immune - intracellular8579753
10 Dysdap -musclemuscle - structural-
11 IL-6_gp130-Jak-STAT -Jak/STAT, IL6 - - cell membrane, cytoplasm9716487
12 IL-6_type_cytok-signal-transduct - - - - intracellular, cell membrane, cytoplasm, nucleus, transcription9716487
13 MS_progression -multiple sclerosis, macrophage, neuron, brainimmune, neural - tissue, cellular8616884
15 T-cell_polarization-chemokine_receptors -chemokineT cell - intracellular, cell membrane, cytoplasm9864948
18 Cytokine_astocytes -multiple sclerosisastrocyte - na9918124
19 Cytokine_microglia -multiple sclerosismicroglia - na9918124
20 Cytokine_oligodendrocytes -multiple sclerosisoligodendrocyte - na9918124
21 Cytokine_neurons -multiple sclerosisneuron - na9918124
22 Cytokine-chemokine_CNS -multiple sclerosis - - na9918124
23 Nongenomic_1a,25-dihydroxyvitamin_D3 -vitamin D3, calciumubiquitous - cytoplasm-
24 endocannabinoids -cannabinoid, synaseneuron - - 9881850
25 endocannabinoid_neuromodulatory -cannabinoid, synapse channel, neurotransmissionneuron - intracellular,cell membrane, cytoplasm9881850
26 cyclin-CDK_complexes -cardiac heart, cell cycle, cyclinheart myocyte - nucleus9798515
27 Cardiac_myocyte_hypertrophic_growth -cell cycle, cardiac myocyte, hypertrophyheart myocyte - nucleus9798515
28 KLFs_cytoplas_dynein_cargo_nerve_axons -axon, dendrite, endosome, dyneinneuron - cytoplasm, endosome9438838
29 530-kD_cytoplasmic_dynein_heavy_chain -dynein, ankyrin, spectrin - - structural, cytoplasmic9438838
30 Kinesin_superfamily_proteins -kinesin - - - 9438838
33 GProt-coupled_Rec_T_Cell_med_Inflamm -blood brain barrier, pertussisneural, immune - tissue, intracellular-
34 Chemokines_in_EAE -EAEneural, immune - tissue, intracellular-
35 Chemokines_EAE_Autoreactive_T_Cells -EAE, proinflammatoryT cell - tissue, intracellular-
36 Death_of_Key_Intracellular_Targets -apoptosis - - cell membrane, cytoplasm9620844
37 Akt-PKB_Effector_of_P13K_in_Vivo - - - - cell membrane, cytoplasm9038334
38 Cell_cycle_arrest_and_apoptosis_ceramide -apoptosis - - - 8943189
39 Deg_of_Chromosomal_DNA -apoptosis death - - cell membrane, cytoplasm9039262
40 Deg_of_Chrom_DNA_TNF-ind_apoptosis -apoptosis - - cell membrane, cytoplasm9039262
41 E2A-HLF_action_in_pro-B_lympocytes -B lymphocytes - - - 9353180
42 Targets_of_Phosphoinositide_3-Kinases -apoptosis - - - 9038334
43 Activator-promoter_complex -promotor transcription - - transcription9922398
44 Sig_Trans_TNFR1-DR3-DR4_DR5 -signal transduction apoptosis - - cell membrane9430227
45 Caspase_activation -apoptosis - - cell membrane, cytoplasm10358774
46 P13K_PTEN -tumor suppression - - - 10200246
47 p13K_and_AKT_suppression_by_PTEN -tumor suppression - - cell membrane10200246
48 mice_minus_JAKs_and_STATs - - - - - 9709499
49 Dystrophin_Glycoprotein_Complex -dystrophin, sarcoglycan - - cell membrane, structural-
50 Hypothesis_of_bronchial_asthma -asthma, mast cell, basophil, eosinophilbasophil, mast - intracelular, cell membrane9465481
51 CD40_and_EBV -signal transduction - - cell membrane9818543
52 B-cell_development_bone_marrow -B cell, bone marrowB cell - intracellular9785673
53 Early-response_Tr_Fac_mast_cells -mast cellsmast cell - cytoplasm, nucleus, transcription9785666
54 T-cell_anergy -T cell anergyT cell - cell membrane, cytoplasm9785671
55 Allergen_recognition_by_Th2_or_Th0_cell -asthma, allergy, allergen - - cell membrane9666606
56 Macrophage_regulation_of_CD4+T_cells -macrophage, autoimmune - - intracellular9639987
57 Post-Golgi&endo_trans_MHC_class_II -golgi, endocytic transport - - endosome9639994
58 (CD40L)_immnosurveillance -immunosurveillance - - intracellular, cell membrane9639986
59 L-type_Ca2+_Tat_immune_cells -TAT, HIV - - intracellular9864943
60 IL-15_rheumatoid-arthritis_synovitis -arthritis - - intracellular, vessel9509762
61 Myc_network -Myc - - transcription, nucleus9695840
62 G1-phase_progression_by_Myc -cell cycle - - nucleus9695840
63 LAT_couples_T-cell_receptor -signaling - - cell membrane, cytoplasm, transcription9695835
64 Clathrin-mediated_endocytosis -endocytosis - - cell membrane9704404
65 Integrin_affinity_modulation -integrin - - cell membrane, cytoplasm9728397
66 Prot_Interac_w_integrin_domains -integrin - - cell membrane, cytoplasm9728397
67 Ikaros_and_signaling_inhibitors -T cell signaling - - cell membrane, cytoplasm, nucleus10204489
68 Mitogen_signaling_in_growth_control -growth control, mitogen signaling - - cell membrane, cytoplasm9695818
69 Survival_signaling_BH3-Bad -apoptosis signaling - - cell membrane, cytoplasm,mitochondria9704409
70 Signal_peptides_(MHC)_class_I_molecules -signal peptides - - cell membrane9789330
71 Id_proteins_G0-to-S_cell_cycle -cell cycle - - nucleus9695810
72 IAP_interaction_with_cell_death_pathways -apoptosis - - cell membrane, cytoplasm9990849
73 Integrins_and_other_cell-surface_receptors -integrin - - - 9789327
74 CD47-IAP_with_avB3 -integrin - - cell membrane9789327
75 Stats_activators_of_Apoptosis -apoptosis - - cell membrane, cytoplasm, nucleus9695817
76 Sig_trans_Ca2_Calcineurin_NF-AT -calcium, T cell, signal transductioncardiac - cell membrane, cytoplasm, nucleus, transcription10089876
77 IkBa_Kinase_JNK_MEKK1 -JNK - - cytoplasm9008162
78 B_Cell_Development -B cell developmentB cell, monocyte - intracellular9989493
79 B_cell_Activation -B cell differentiationB cell - intracellular9989493
80 T_cell_Activation -T cellT cell - intracellular9989493
81 Structure_of_Caps_and_SMACs -Cytoskeleton, lymphocyte activation - - cell membrane9989492
82 TCR_and_Cap_or_SMAC -T cell cytoskeleton - - cell membrane, cytoplasm9989492
83 Growth_factors_Survival_factors_Mitogens - - - - cell membrane, cytoplasm9988218
84 Ubiquitination_Pathways_Cell_Cycle -ubiquitin - - nucleus10338207
85 Nuc_Rec-Coact_Complex -transcription complex - - transcription10199396
86 Apoptosis_Nematode&_Vert -apoptosis, death - - - 9988219
87 Activation_ERK-MAPK_Synaptic_Act -synapse, neuron, synapseneuron - cell membrane, cytoplasm, nucleus10402188
88 Alternatively_Activated_APC -APC, dendritic cell, macrophage, monocyte - - intracellular10072066
89 CD4_T_Cell_Differentiation -T cell, macrophage, TH1, TH2 - - intracellular10204493
90 IB_and-cat-Arm_processing_of_Ci -ubiquitin, proteosome - - cytoplasm10072378
91 Trials_and_travels_of_tRNA -tRNA, necleolus - - cytoplasm, nucleus9887094
92 Ancient_Host_Defense_Pathways -Cell cycle, Rb - - cell membrane, cytoplasm, nucleus9734363
93 Insulin-Secretion-Gene-Transcription -insulin, calcium, glucose, liver - - cell membrane, cytoplasm, nucleus, transcription9660977
94 E2F_transcriptional_activity_cell_cycle -cell cycle, Rb - - nucleus10331086
95 GLUCOSE_PRODUCTION_LIVER -glucose, liver - - cytoplasm10448530
96 Immune_injury_MS-lesions_genetic_environ -multiple sclerosis, myelin, MS, neuron, axonneuron, oligodendrocyte - intracellular, tissue10392579
97 Immune_injury_MS-lesions_MS_antigen -multiple sclerosis, myelin, MS, neuron, axonneuron, oligo - intracellular, tissue10392579
98 Dietary_Fat_and_Gene_Transcription -insulin, glucose, liverliver - nucleus, transcription10448517
99 NF-kB_activation -NFkB signaling - - cell membrane, cytoplasm, nucleus10354583
100 MAPK_signaling_cascades -mitogen signaling - - cell membrane, cytoplasm, nucleus10322405
101 Gprot_coupled_Rec_MAP_Kinase -signal transduction - - cell membrane, cytoplasm,10322405
102 Cholesterol_Stress_Response -cholesterol, stress - - cell membrane, cytoplasm, nucleus-
103 Ca2-calmodulin_PK_cascade -calcium, calmodulin - - cytoplasm, nucleus10366852
104 Insulin_signaling -insulin - - cell membrane, cytoplasm10227847
105 Signaling_glucose_uptake -insulin, glucose - - cell membrane, cytoplasm10227847
106 Glycogen_synthase-synthesis -insulin, glycogen - - cell membrane, cytoplasm10227847
107 mRNA_translation-protein_synthesis -insulin - - cell membrane, cytoplasm10227847
108 Regulating_glucose_transport -insulin - - cell membrane, cytoplasm9890935
109 Chemokine_families -inflammation, hematopoeisis, infection - - - 10562292
110 CRHandLC-NA -stress, HPA axis, immune, infection, allergy, cancerbrain, CNS, lymphoid - intracellular10511695
111 Stress_influences_immunity -stress, HPA axis, immune, infection, allergy, cancermast cell, NK, T cell, macrophage - intracellular10511695
112 StressandCRHinfluence -stress, HPA axis, immune, infection, allergy, cancerbrain, immune - intracellular10511695
113 Th1andTh2cells -cellular immunity, humoral immunity, TH1, TH2, cytokinelymphoid - intracellular10511695
115 Activation_Rho_family_GTPases - - - - - 10872457
116 Targets_of_Rho - - - - - 10872457
117 Targets_of_Rac_and_Cdc42 - - - - - 10872457
118 Regulation_of_myosin_light_chain - - - - - 10872457
119 SchizGeneticModel -schizophrenia, genetic, susceptibility, brainbrain - - 10698816
120 SchizSymptomsGenetic -schizophrenia, genetic, susceptibility, brainbrain - - 10698816
121 OligoDiff -oligodendrocyte, myelin, brain, stem cellbrain - cellular9880596
123 T_cells_and_intestinal_epithelia - inflammation, gut, intestine, T cellgut, intestine - - 10689299
124 GH-IGF1_thymopoiesis -thymopoiesis, T cell - - - 10877541
125 T_Cells_CNS-APCs -brain, inflammation, blood brain barrier, astrocyte, microgliabrain - - 10689302
126 Apoptosis-Bcl-2 -mitochondria, stress, apoptosismitochondria - mitochondria10929706
127 Mito-stress -mitochondria, stress, apoptosismitochondria - mitochondria10929706
128 Oxidative_sig-PS-L -mitochondria, stress, apoptosis - - mitochondria10899301
129 Oxidative_sig-PS-R -mitochondria, stress, apoptosis - - mitochondria10899301
130 normal_artery -Atherosclerosisartery - tissue11001066
131 Lesion_initiation -Atherosclerosisartery - tissue11001066
132 Atherosclerosis_Inflammation -Atherosclerosisartery - tissue11001066
133 Atherosclerosis-Foam-cell_formation -Atherosclerosisartery - tissue11001066
134 Atherosclerosis-Fibrous_plaques -Atherosclerosisartery - tissue11001066
135 Atherosclerosis_Lesions_Thrombosis -Atherosclerosisartery - tissue11001066
136 CG1 -Apoptosis, phagocytosisAPC, phagocytes - cell membrane10608085
137 Apoptotic_and_Phagocytotic_cell surfaces -Apoptosis, phagocytosisAPC, phagocytes - cell membrane10679400
138 Fig1AB_Eukaryotic_transcriptional_control -basal transcriptionubiquitous - transcription, nucleus11040209
139 Fig1CD_Eukaryotic_transcriptional_control -basal transcriptionubiquitous - transcription, nucleus11040209
140 Fig2_assembly_model_transcription -basal transcriptionubiquitous - transcription, nucleus11040209
141 Fig3_pre-assembly_model_initiation -basal transcriptionubiquitous - transcription, nucleus11040209
142 Fig4AB_signal-mediated_transfer_model -basal transcriptionubiquitous - transcription, nucleus11040209
143 Fig4CD_signal-mediated_transfer_model -basal transcriptionubiquitous - transcription, nucleus11040209
144 Allergy-inhibition_by_infection1 -atopy, allergy, asthma, infection - atopy, allergy, asthma, infectiontissue10379050
145 Exacerbation-allergy-infection2 -atopy, allergy, asthma, infection - atopy, allergy, asthma, infectiontissue10379050
146 Model-Allergy-infection3 -atopy, allergy, asthma, infection - atopy, allergy, asthma, infectiontissue10379050
147 histone_acetylation_stabilizing_TFIID_interaction - - ubiquitous - transcription, nucleus11395415
148 PCAF_GCN5-TFIID-complexes - - ubiquitous - transcription, nucleus11395415
149 transcriptional_coactivator_complexes - - ubiquitous - transcription, nucleus11395415
150 caspase_and_NFKB_activation -stress, cell death, inflammation - - intracellular11393153
151 pro-apoptotic_actions_of_altered_APP&PS1 -Parkinson, Alzheimer, apoptosisneuron, brainParkinson's, Alzheimer'ssynapse11253364
152 altered_synaptic_signalling-neurodegenerative_disorders -Parkinson, Alzheimer, apoptosisneuron, brainParkinson's, Alzheimer'ssynapse11253364
153 nucleotide_excision_repair -DNA repair, DNA damageubiquitousxeroderma pigmentosum, Cockaynenucleus-
154 Transcription-coupled_nucleotide_excision_repair -DNA repair, DNA damageubiquitousxeroderma pigmentosum, Cockaynenucleus-
155 MBL2-PrimaryBiliaryCirrhosis -PrimaryBiliaryCirrhosis, mannose,MBL2GAD,MBL2 - Primary Biliary Cirrhosisserum11712863
156 NOD2-GAD -Crohn's disease,NOD2,NOD2GAD - Crohn's disease, Blau syndrometranscription11385576
157 14-3-3_Cell_Cycle -14-3-3, cell cycle,YHWAHubiquitous - nucleus11598960
158 14-3-3_signal_transduction -14-3-3, signal transduction,YHWAHubiquitous - cell membrane,intracellular11598960
159 14-3-3_Apoptosis -14-3-3, apoptosis,YHWAHubiquitous - intracellular11598960
160 abT-cell_development - - - - cell membrane11114425
161 Subunits_pre-TCR_and_TCR -TCR, CD3T Cell - cell membrane11114425
162 signal_specification_ pre-TCR -TCR, CD4, CD8T Cell - cell membrane11114425
163 cytokine_receptor_signaling_CD45 - - - - cell membrane11323691
164 CCKAR_promoter -CCKA, schizophrenia - schizophreniapromoter11549403
165 Caloric_restriction -caloric restriction, glucose, liver, gluconeogenesisliver - intracellular10444432
166 MHC_Class_I_Inhibitory_Receptors -MHCubiquitous, lymphoidautoimmunecell membrane11567627
167 MHC_Class_I_related_and_activating_receptors -MHCubiquitous, lymphoidautoimmunecell membrane11567627
168 Wnt_signaling_pathway -Wnt, cadherin, B-catenin - - cell membrane, intracellular11532397
169 LPS_stimulation_of_monocytes -septic shock, LPS, endotoxinmonocytesseptic shockcell membrane, intracellular, transcription11257452
170 Toll_proteins -septic shock, LPS, endotoxinmonocytesseptic shockcell membrane11257452
171 human_proximal_CD14_promoter -septic shock, malaria, atopymonocyteatopy, septic shock, malariapromoter11698458
172 PRODH2locus -schizophrenia, PRODH2 - schizophrenia - 11891283
173 calcineurin_signaling_cardiac_myocyte -heartcardiac myocytesheart failure, hypertrophic heart disease,cardiomyopathyintracellular, nucleus11922891
174 B-Pix-E20 -brain, development,GTPasebrain - tissue10860822
175 B-Pix-E18 -brain, development,GTPasebrain - tissue10860822
176 B-Pix-P0 -brain, development,GTPasebrain - tissue10860822
177 B-Pix-P7 -brain, development,GTPasebrain - tissue10860822
178 B-Pix-P12 -brain, development,GTPasebrain - tissue10860822
179 B-Pix-P18 -brain, development,GTPasebrain - tissue10860822
180 B-Pix-Adult -brain, development,GTPasebrain - tissue10860822
181 GPCR_induced_signaling -GPCR, G-Protein, HIV, chemokine - HIVintracellular11325604 11325604 11325604
182 Homocysteine_formation -HomocysteineubiquitousRenal failure, Neural tube defects,Hyperhomocysteinemia, Cancerplasma11282420
183 MTHFR_C677T_polymorphism -HomocysteineubiquitousRenal failure, Neural tube defects,Hyperhomocysteinemia, Cancerplasma11282420

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